Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC092183.1-201ENST00000469884 875 ntBASIC15.17■□□□□ 0.02
SNX4O95219 AC079140.1-201ENST00000508039 487 ntBASIC15.17■□□□□ 0.02
SNX4O95219 KRT8P48-201ENST00000515599 1220 ntBASIC15.17■□□□□ 0.02
SNX4O95219 IGHV3-62-201ENST00000520057 340 ntBASIC15.17■□□□□ 0.02
SNX4O95219 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.17■□□□□ 0.02
SNX4O95219 AC243562.1-201ENST00000560672 389 ntBASIC15.17■□□□□ 0.02
SNX4O95219 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.17■□□□□ 0.02
SNX4O95219 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.17■□□□□ 0.02
SNX4O95219 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 AL671710.1-201ENST00000610245 2349 ntBASIC15.17■□□□□ 0.02
SNX4O95219 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SNX4O95219 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SNX4O95219 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNX4O95219 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 SNX33P1-201ENST00000592116 1762 ntBASIC15.16■□□□□ 0.02
SNX4O95219 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
SNX4O95219 AC016027.1-202ENST00000607927 1699 ntBASIC15.16■□□□□ 0.02
SNX4O95219 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.16■□□□□ 0.02
SNX4O95219 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SNX4O95219 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX4O95219 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX4O95219 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.15■□□□□ 0.02
SNX4O95219 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.15■□□□□ 0.02
SNX4O95219 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.15■□□□□ 0.02
SNX4O95219 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.15■□□□□ 0.02
SNX4O95219 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.15■□□□□ 0.02
SNX4O95219 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.15■□□□□ 0.02
SNX4O95219 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.15■□□□□ 0.02
SNX4O95219 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 AC008267.7-201ENST00000624570 1194 ntBASIC15.15■□□□□ 0.02
SNX4O95219 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms