Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CACNA1FO60840 LINC02199-201ENST00000506655 2702 ntBASIC19.83■□□□□ 0.77
CACNA1FO60840 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CACNA1FO60840 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CACNA1FO60840 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA1FO60840 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA1FO60840 VDAC1P7-201ENST00000462417 847 ntBASIC19.83■□□□□ 0.77
CACNA1FO60840 AC022137.2-201ENST00000503482 481 ntBASIC19.83■□□□□ 0.77
CACNA1FO60840 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.83■□□□□ 0.77
CACNA1FO60840 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA1FO60840 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 AC092552.1-201ENST00000547243 906 ntBASIC19.83■□□□□ 0.77
CACNA1FO60840 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CACNA1FO60840 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA1FO60840 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA1FO60840 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CACNA1FO60840 AC092127.1-201ENST00000567093 3455 ntBASIC19.83■□□□□ 0.77
CACNA1FO60840 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1FO60840 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1FO60840 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1FO60840 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.83■□□□□ 0.76
CACNA1FO60840 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CACNA1FO60840 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.83■□□□□ 0.76
CACNA1FO60840 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CACNA1FO60840 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CACNA1FO60840 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.83■□□□□ 0.76
CACNA1FO60840 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.83■□□□□ 0.76
CACNA1FO60840 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1FO60840 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.83■□□□□ 0.76
CACNA1FO60840 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CACNA1FO60840 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.83■□□□□ 0.76
CACNA1FO60840 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1FO60840 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA1FO60840 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA1FO60840 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1FO60840 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CACNA1FO60840 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1FO60840 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.82■□□□□ 0.76
CACNA1FO60840 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1FO60840 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1FO60840 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CACNA1FO60840 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA1FO60840 TTTY23B-201ENST00000442790 549 ntBASIC19.81■□□□□ 0.76
CACNA1FO60840 ACA64.2-201ENST00000459014 129 ntBASIC19.81■□□□□ 0.76
CACNA1FO60840 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.81■□□□□ 0.76
CACNA1FO60840 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1FO60840 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1FO60840 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms