Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 AL139400.1-201ENST00000366220 510 ntBASIC15.67■□□□□ 0.1
E2F3O00716 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 TFAMP1-201ENST00000412727 736 ntBASIC15.67■□□□□ 0.1
E2F3O00716 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 AC142381.1-201ENST00000426099 345 ntBASIC15.67■□□□□ 0.1
E2F3O00716 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 AL671277.1-201ENST00000429656 993 ntBASIC15.67■□□□□ 0.1
E2F3O00716 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 AC092364.2-202ENST00000597012 1073 ntBASIC15.67■□□□□ 0.1
E2F3O00716 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 AC008267.7-201ENST00000624570 1194 ntBASIC15.67■□□□□ 0.1
E2F3O00716 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.67■□□□□ 0.1
E2F3O00716 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.67■□□□□ 0.1
E2F3O00716 AC020658.6-201ENST00000623564 1870 ntBASIC15.67■□□□□ 0.1
E2F3O00716 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 SSR4P1-203ENST00000599569 2260 ntBASIC15.66■□□□□ 0.1
E2F3O00716 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 ACTG1P14-201ENST00000446382 1122 ntBASIC15.66■□□□□ 0.1
E2F3O00716 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.66■□□□□ 0.1
E2F3O00716 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.66■□□□□ 0.1
E2F3O00716 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.66■□□□□ 0.1
E2F3O00716 AC027307.2-201ENST00000591252 911 ntBASIC15.66■□□□□ 0.1
E2F3O00716 AC011467.4-201ENST00000594891 528 ntBASIC15.66■□□□□ 0.1
E2F3O00716 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 AC144831.1-201ENST00000573312 2656 ntBASIC15.66■□□□□ 0.1
E2F3O00716 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
E2F3O00716 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
E2F3O00716 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms