Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AC134407.2-201ENST00000625089 1978 ntBASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AL365203.3-201ENST00000609742 2057 ntBASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 BNIP3P1-202ENST00000550043 1585 ntBASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 METTL21AP1-201ENST00000438852 635 ntBASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 EEF1DP4-201ENST00000446006 880 ntBASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 BANF1P1-201ENST00000553684 263 ntBASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.44□□□□□ -0.1
HDGFL3Q9Y3E1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 TUBB3P1-201ENST00000405796 1332 ntBASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 SPDYE17-201ENST00000412399 783 ntBASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 MTND6P24-201ENST00000440466 518 ntBASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 FAM86GP-201ENST00000448322 971 ntBASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms