Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 FAM185BP-201ENST00000443595 716 ntBASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 AC093724.1-201ENST00000448659 1027 ntBASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 OR7E14P-202ENST00000530490 1290 ntBASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 AC087481.3-201ENST00000602886 1894 ntBASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXJ3Q9UPW0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FOXJ3Q9UPW0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 HMGA1P7-201ENST00000406908 502 ntBASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SLC25A1P1-201ENST00000528351 927 ntBASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 AL671883.3-201ENST00000603274 991 ntBASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 AL645728.2-201ENST00000641974 660 ntBASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXJ3Q9UPW0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXJ3Q9UPW0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms