Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 AC011477.6-201ENST00000604980 1927 ntBASIC15.62■□□□□ 0.09
NDE1Q9NXR1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 AL136038.3-201ENST00000561909 1096 ntBASIC15.62■□□□□ 0.09
NDE1Q9NXR1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 NSUN5P1-202ENST00000421140 1535 ntBASIC15.62■□□□□ 0.09
NDE1Q9NXR1 NSUN5P2-203ENST00000457352 1529 ntBASIC15.62■□□□□ 0.09
NDE1Q9NXR1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDE1Q9NXR1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 AC005912.2-201ENST00000619492 2400 ntBASIC15.61■□□□□ 0.09
NDE1Q9NXR1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 KRT17P6-201ENST00000453795 1220 ntBASIC15.61■□□□□ 0.09
NDE1Q9NXR1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 AL589182.2-201ENST00000619332 1049 ntBASIC15.61■□□□□ 0.09
NDE1Q9NXR1 AC006011.2-201ENST00000621313 1158 ntBASIC15.61■□□□□ 0.09
NDE1Q9NXR1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.61■□□□□ 0.09
NDE1Q9NXR1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 AC013726.1-201ENST00000563747 2285 ntBASIC15.61■□□□□ 0.09
NDE1Q9NXR1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDE1Q9NXR1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDE1Q9NXR1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
NDE1Q9NXR1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDE1Q9NXR1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDE1Q9NXR1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDE1Q9NXR1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms