Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 HBZP1-201ENST00000354915 429 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MIR1238-201ENST00000408483 83 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ACTG1P4-201ENST00000425123 1122 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 HLA-F-220ENST00000434407 884 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 DUX4L17-201ENST00000557360 1267 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GCSHP2-201ENST00000560971 527 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC233702.5-201ENST00000584107 538 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AP000525.1-201ENST00000608286 694 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC079602.3-201ENST00000623931 403 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AL359258.3-201ENST00000622910 2331 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 POR-201ENST00000394893 2532 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AL805961.2-201ENST00000642139 4817 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 KRT8P39-201ENST00000396270 1433 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC125634.1-201ENST00000438758 1403 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MAPK10-262ENST00000641051 5738 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms