Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.4□□□□□ -0.43
SHANK2-AS3Q9BTD1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 GPX1P2-201ENST00000429271 606 ntBASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 RNA5SP415-201ENST00000517246 115 ntBASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC134407.2-201ENST00000625089 1978 ntBASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SHANK2-AS3Q9BTD1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 WASH6P-202ENST00000359512 1437 ntBASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL161645.1-201ENST00000622716 1255 ntBASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms