Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 AL512638.1-201ENST00000457493 794 ntBASIC19.12■□□□□ 0.65
DDX11Q96FC9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 AL390754.1-201ENST00000619088 582 ntBASIC19.12■□□□□ 0.65
DDX11Q96FC9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 TSPY16P-201ENST00000449843 468 ntBASIC19.11■□□□□ 0.65
DDX11Q96FC9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 AC069120.2-201ENST00000524091 540 ntBASIC19.11■□□□□ 0.65
DDX11Q96FC9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 AL138918.1-201ENST00000568306 659 ntBASIC19.11■□□□□ 0.65
DDX11Q96FC9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 PKD1P5-201ENST00000532415 10291 ntBASIC19.11■□□□□ 0.65
DDX11Q96FC9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX11Q96FC9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX11Q96FC9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.1■□□□□ 0.65
DDX11Q96FC9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX11Q96FC9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX11Q96FC9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX11Q96FC9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX11Q96FC9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.09■□□□□ 0.65
DDX11Q96FC9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms