Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.22■□□□□ 0.35
SEMA4DQ92854 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 METTL21AP1-201ENST00000438852 635 ntBASIC17.22■□□□□ 0.35
SEMA4DQ92854 AL079307.3-201ENST00000556114 283 ntBASIC17.22■□□□□ 0.35
SEMA4DQ92854 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 GPALPP1-207ENST00000611650 899 ntBASIC17.22■□□□□ 0.35
SEMA4DQ92854 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 AL035456.1-201ENST00000456064 1369 ntBASIC17.22■□□□□ 0.35
SEMA4DQ92854 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA4DQ92854 AC092850.2-201ENST00000623821 2697 ntBASIC17.22■□□□□ 0.35
SEMA4DQ92854 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SEMA4DQ92854 TUBB3P1-201ENST00000405796 1332 ntBASIC17.21■□□□□ 0.35
SEMA4DQ92854 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 RPL37AP1-201ENST00000412502 279 ntBASIC17.21■□□□□ 0.35
SEMA4DQ92854 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 AC051619.7-201ENST00000568314 623 ntBASIC17.21■□□□□ 0.35
SEMA4DQ92854 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA4DQ92854 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SEMA4DQ92854 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
SEMA4DQ92854 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms