Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 AL080243.2-201ENST00000418783 582 ntBASIC17.12■□□□□ 0.33
LMO3Q8TAP4 MTND6P24-201ENST00000440466 518 ntBASIC17.12■□□□□ 0.33
LMO3Q8TAP4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 TMBIM7P-203ENST00000641617 1718 ntBASIC17.12■□□□□ 0.33
LMO3Q8TAP4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO3Q8TAP4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 LINC00554-201ENST00000564841 3011 ntBASIC17.11■□□□□ 0.33
LMO3Q8TAP4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 RPL37AP1-201ENST00000412502 279 ntBASIC17.11■□□□□ 0.33
LMO3Q8TAP4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 AC139530.3-201ENST00000620344 690 ntBASIC17.11■□□□□ 0.33
LMO3Q8TAP4 Z92544.3-201ENST00000624747 417 ntBASIC17.11■□□□□ 0.33
LMO3Q8TAP4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 AC127383.1-201ENST00000444697 1800 ntBASIC17.11■□□□□ 0.33
LMO3Q8TAP4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LMO3Q8TAP4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 AC138932.1-201ENST00000534164 6830 ntBASIC17.1■□□□□ 0.33
LMO3Q8TAP4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms