Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 SBF1P1-201ENST00000444527 5631 ntBASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM42Q8IWZ5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 AC138035.3-201ENST00000622706 2791 ntBASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 AC132008.2-207ENST00000454517 770 ntBASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 EMBP1-201ENST00000458200 901 ntBASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 AC011477.6-201ENST00000604980 1927 ntBASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM42Q8IWZ5 AP003680.1-201ENST00000598970 3660 ntBASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 GGTLC5P-201ENST00000617623 998 ntBASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms