Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC005412.3-201ENST00000580309 715 ntBASIC10.73□□□□□ -0.69
SCXQ7RTU7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 AC026120.1-201ENST00000611536 926 ntBASIC10.73□□□□□ -0.69
SCXQ7RTU7 SPDYE10P-202ENST00000612005 668 ntBASIC10.73□□□□□ -0.69
SCXQ7RTU7 SPDYE8P-202ENST00000612377 668 ntBASIC10.73□□□□□ -0.69
SCXQ7RTU7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 LINC00628-201ENST00000628516 1289 ntBASIC10.73□□□□□ -0.69
SCXQ7RTU7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 AC024909.3-201ENST00000611513 2257 ntBASIC10.73□□□□□ -0.69
SCXQ7RTU7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SCXQ7RTU7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.73□□□□□ -0.69
SCXQ7RTU7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AL627223.1-201ENST00000416693 442 ntBASIC10.72□□□□□ -0.69
SCXQ7RTU7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AC005237.2-201ENST00000434368 219 ntBASIC10.72□□□□□ -0.69
SCXQ7RTU7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 FAM86GP-201ENST00000448322 971 ntBASIC10.72□□□□□ -0.69
SCXQ7RTU7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 MIR4515-201ENST00000584082 81 ntBASIC10.72□□□□□ -0.69
SCXQ7RTU7 AC093512.1-201ENST00000617969 520 ntBASIC10.72□□□□□ -0.69
SCXQ7RTU7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.72□□□□□ -0.69
SCXQ7RTU7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SCXQ7RTU7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
SCXQ7RTU7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC10.71□□□□□ -0.69
SCXQ7RTU7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC10.71□□□□□ -0.69
SCXQ7RTU7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.71□□□□□ -0.69
SCXQ7RTU7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SCXQ7RTU7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms