Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 AC006058.4-201ENST00000624016 1670 ntBASIC15□□□□□ -0.01
REEP3Q6NUK4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15□□□□□ -0.01
REEP3Q6NUK4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15□□□□□ -0.01
REEP3Q6NUK4 KRT18P2-201ENST00000447938 1258 ntBASIC15□□□□□ -0.01
REEP3Q6NUK4 AC074386.1-202ENST00000463561 864 ntBASIC15□□□□□ -0.01
REEP3Q6NUK4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
REEP3Q6NUK4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15□□□□□ -0.01
REEP3Q6NUK4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 AC023157.3-201ENST00000619086 2088 ntBASIC15□□□□□ -0.01
REEP3Q6NUK4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15□□□□□ -0.01
REEP3Q6NUK4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 TPM4P1-201ENST00000436100 807 ntBASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AC009078.2-202ENST00000463353 338 ntBASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AC098859.1-201ENST00000502915 1238 ntBASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AC112191.1-201ENST00000523689 701 ntBASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
REEP3Q6NUK4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
REEP3Q6NUK4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms