Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 AL592309.1-201ENST00000443127 649 ntBASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 PCGF3-213ENST00000620529 1899 ntBASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 AC073439.1-201ENST00000624121 1774 ntBASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 FOXO1B-201ENST00000504678 1527 ntBASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 FAM58DP-201ENST00000428076 619 ntBASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AC027307.2-201ENST00000591252 911 ntBASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 PPT1-215ENST00000641471 2368 ntBASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AP005117.1-202ENST00000581724 1908 ntBASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.31■□□□□ 0.2
KHDC1Q4VXA5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 AL627223.1-201ENST00000416693 442 ntBASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 SNHG9-202ENST00000564014 471 ntBASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 AC020765.3-201ENST00000613051 740 ntBASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 TCAF2P1-201ENST00000291129 2421 ntBASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms