Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC9.41□□□□□ -0.9
TMEM258P61165 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 AC092127.1-201ENST00000567093 3455 ntBASIC9.41□□□□□ -0.9
TMEM258P61165 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
TMEM258P61165 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM258P61165 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM258P61165 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 AC011481.3-201ENST00000623895 5594 ntBASIC9.4□□□□□ -0.9
TMEM258P61165 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
TMEM258P61165 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 DUX4L29-201ENST00000425409 679 ntBASIC9.4□□□□□ -0.9
TMEM258P61165 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
TMEM258P61165 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC9.4□□□□□ -0.9
TMEM258P61165 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 AC120498.10-201ENST00000621827 505 ntBASIC9.4□□□□□ -0.9
TMEM258P61165 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TMEM258P61165 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM258P61165 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM258P61165 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC9.4□□□□□ -0.91
TMEM258P61165 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC9.4□□□□□ -0.91
TMEM258P61165 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 HARS-203ENST00000431330 1774 ntTSL 2 BASIC9.4□□□□□ -0.91
TMEM258P61165 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM258P61165 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TMEM258P61165 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
TMEM258P61165 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
TMEM258P61165 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM258P61165 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM258P61165 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms