Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 AC139749.1-202ENST00000617529 3139 ntBASIC13.17□□□□□ -0.3
SPCS3P61009 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SPCS3P61009 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.16□□□□□ -0.3
SPCS3P61009 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SPCS3P61009 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SPCS3P61009 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SPCS3P61009 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SPCS3P61009 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.16□□□□□ -0.3
SPCS3P61009 FAM210CP-201ENST00000445714 574 ntBASIC13.16□□□□□ -0.3
SPCS3P61009 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
SPCS3P61009 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SPCS3P61009 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.16□□□□□ -0.3
SPCS3P61009 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.16□□□□□ -0.3
SPCS3P61009 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.16□□□□□ -0.3
SPCS3P61009 AC025062.2-201ENST00000605477 670 ntBASIC13.16□□□□□ -0.3
SPCS3P61009 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.16□□□□□ -0.3
SPCS3P61009 AC107918.4-202ENST00000641623 219 ntBASIC13.16□□□□□ -0.3
SPCS3P61009 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
SPCS3P61009 AC073347.1-201ENST00000421633 2643 ntBASIC13.16□□□□□ -0.3
SPCS3P61009 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.16□□□□□ -0.3
SPCS3P61009 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS3P61009 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SPCS3P61009 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
SPCS3P61009 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
SPCS3P61009 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.15□□□□□ -0.3
SPCS3P61009 KRT18P31-201ENST00000506277 1292 ntBASIC13.15□□□□□ -0.3
SPCS3P61009 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.15□□□□□ -0.3
SPCS3P61009 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SPCS3P61009 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.15□□□□□ -0.3
SPCS3P61009 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 MIR3652-201ENST00000579335 131 ntBASIC13.15□□□□□ -0.3
SPCS3P61009 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.15□□□□□ -0.3
SPCS3P61009 AC021097.1-201ENST00000607902 574 ntBASIC13.15□□□□□ -0.3
SPCS3P61009 AC093458.2-201ENST00000623150 629 ntBASIC13.15□□□□□ -0.3
SPCS3P61009 AC097376.2-205ENST00000610159 5334 ntBASIC13.15□□□□□ -0.3
SPCS3P61009 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SPCS3P61009 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.15□□□□□ -0.3
SPCS3P61009 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.15□□□□□ -0.3
SPCS3P61009 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.15□□□□□ -0.3
SPCS3P61009 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SPCS3P61009 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS3P61009 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SPCS3P61009 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SPCS3P61009 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SPCS3P61009 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.14□□□□□ -0.31
SPCS3P61009 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SPCS3P61009 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SPCS3P61009 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SPCS3P61009 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms