Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.86□□□□□ -0.19
AP3S2P59780 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 AGAP7P-201ENST00000582299 2062 ntBASIC13.86□□□□□ -0.19
AP3S2P59780 AGAP14-201ENST00000624701 2060 ntBASIC13.86□□□□□ -0.19
AP3S2P59780 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.86□□□□□ -0.19
AP3S2P59780 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.86□□□□□ -0.19
AP3S2P59780 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.86□□□□□ -0.19
AP3S2P59780 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.86□□□□□ -0.19
AP3S2P59780 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.86□□□□□ -0.19
AP3S2P59780 AL353135.1-201ENST00000606729 504 ntBASIC13.86□□□□□ -0.19
AP3S2P59780 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.86□□□□□ -0.19
AP3S2P59780 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 C18orf15-201ENST00000623680 2534 ntBASIC13.86□□□□□ -0.19
AP3S2P59780 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.85□□□□□ -0.19
AP3S2P59780 AC112693.3-201ENST00000624819 1983 ntBASIC13.85□□□□□ -0.19
AP3S2P59780 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
AP3S2P59780 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
AP3S2P59780 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.85□□□□□ -0.19
AP3S2P59780 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
AP3S2P59780 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 TSPY22P-201ENST00000427496 604 ntBASIC13.85□□□□□ -0.19
AP3S2P59780 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.85□□□□□ -0.19
AP3S2P59780 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 AC011558.1-201ENST00000623459 338 ntBASIC13.85□□□□□ -0.19
AP3S2P59780 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
AP3S2P59780 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S2P59780 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S2P59780 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms