Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 AC006277.1-201ENST00000624348 1610 ntBASIC18.41■□□□□ 0.54
CHMP4BP1P59074 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CHMP4BP1P59074 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 TSSK5P-201ENST00000423978 907 ntBASIC18.4■□□□□ 0.54
CHMP4BP1P59074 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AC073389.1-201ENST00000595595 795 ntBASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 AC024909.3-201ENST00000611513 2257 ntBASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4BP1P59074 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP4BP1P59074 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP4BP1P59074 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP4BP1P59074 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.39■□□□□ 0.54
CHMP4BP1P59074 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP4BP1P59074 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 PIN1P1-201ENST00000412108 996 ntBASIC18.39■□□□□ 0.53
CHMP4BP1P59074 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.39■□□□□ 0.53
CHMP4BP1P59074 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.39■□□□□ 0.53
CHMP4BP1P59074 AL662799.1-202ENST00000614205 422 ntBASIC18.39■□□□□ 0.53
CHMP4BP1P59074 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4BP1P59074 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 CETN4P-206ENST00000642099 2168 ntBASIC18.38■□□□□ 0.53
CHMP4BP1P59074 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms