Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HMGCLP35914 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
HMGCLP35914 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGCLP35914 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HMGCLP35914 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 MIR943-201ENST00000401286 94 ntBASIC15.95■□□□□ 0.14
HMGCLP35914 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 AC092580.3-201ENST00000430932 139 ntBASIC15.95■□□□□ 0.14
HMGCLP35914 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
HMGCLP35914 SERBP1P3-201ENST00000459980 809 ntBASIC15.95■□□□□ 0.14
HMGCLP35914 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
HMGCLP35914 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.95■□□□□ 0.14
HMGCLP35914 AC027369.6-201ENST00000525520 931 ntBASIC15.95■□□□□ 0.14
HMGCLP35914 DUX4L27-201ENST00000554796 1261 ntBASIC15.95■□□□□ 0.14
HMGCLP35914 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGCLP35914 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGCLP35914 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCLP35914 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCLP35914 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
HMGCLP35914 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGCLP35914 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HMGCLP35914 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCLP35914 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 TREML5P-201ENST00000421694 576 ntBASIC15.94■□□□□ 0.14
HMGCLP35914 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.94■□□□□ 0.14
HMGCLP35914 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCLP35914 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGCLP35914 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 AC093512.1-201ENST00000617969 520 ntBASIC15.94■□□□□ 0.14
HMGCLP35914 MIR6069-201ENST00000620069 79 ntBASIC15.94■□□□□ 0.14
HMGCLP35914 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCLP35914 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
HMGCLP35914 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCLP35914 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCLP35914 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HMGCLP35914 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCLP35914 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGCLP35914 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGCLP35914 AZGP1P1-201ENST00000411909 902 ntBASIC15.93■□□□□ 0.14
HMGCLP35914 AC055876.3-201ENST00000431496 288 ntBASIC15.93■□□□□ 0.14
HMGCLP35914 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.93■□□□□ 0.14
HMGCLP35914 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.93■□□□□ 0.14
HMGCLP35914 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 AC138649.4-201ENST00000612222 287 ntBASIC15.93■□□□□ 0.14
HMGCLP35914 AC106028.4-201ENST00000614509 607 ntBASIC15.93■□□□□ 0.14
HMGCLP35914 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGCLP35914 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 AL033527.5-202ENST00000641632 1098 ntBASIC15.93■□□□□ 0.14
HMGCLP35914 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGCLP35914 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms