Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT20P35900 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.36■□□□□ 0.05
KRT20P35900 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT20P35900 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.36■□□□□ 0.05
KRT20P35900 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT20P35900 AC109635.5-201ENST00000533593 962 ntBASIC15.36■□□□□ 0.05
KRT20P35900 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
KRT20P35900 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT20P35900 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
KRT20P35900 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
KRT20P35900 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.36■□□□□ 0.05
KRT20P35900 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
KRT20P35900 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT20P35900 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
KRT20P35900 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT20P35900 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT20P35900 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.35■□□□□ 0.05
KRT20P35900 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT20P35900 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 SNX33P1-201ENST00000592116 1762 ntBASIC15.35■□□□□ 0.05
KRT20P35900 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
KRT20P35900 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.35■□□□□ 0.05
KRT20P35900 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 AC004832.2-201ENST00000426397 482 ntBASIC15.35■□□□□ 0.05
KRT20P35900 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 PGAM5P1-201ENST00000518923 814 ntBASIC15.35■□□□□ 0.05
KRT20P35900 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.35■□□□□ 0.05
KRT20P35900 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT20P35900 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
KRT20P35900 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
KRT20P35900 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 LINC02228-204ENST00000642115 2962 ntBASIC15.35■□□□□ 0.05
KRT20P35900 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
KRT20P35900 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT20P35900 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
KRT20P35900 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT20P35900 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 OR2I1P-209ENST00000641730 5365 ntBASIC15.34■□□□□ 0.05
KRT20P35900 AC013268.4-201ENST00000637413 2228 ntBASIC15.34■□□□□ 0.05
KRT20P35900 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
KRT20P35900 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
KRT20P35900 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT20P35900 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT20P35900 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT20P35900 MIR3687-2-201ENST00000577708 61 ntBASIC15.34■□□□□ 0.05
KRT20P35900 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT20P35900 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT20P35900 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT20P35900 MIR3687-1-201ENST00000614492 61 ntBASIC15.34■□□□□ 0.05
KRT20P35900 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
KRT20P35900 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT20P35900 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms