Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA3P32297 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 AL355306.1-201ENST00000415580 579 ntBASIC16.97■□□□□ 0.31
CHRNA3P32297 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA3P32297 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA3P32297 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA3P32297 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRNA3P32297 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHRNA3P32297 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA3P32297 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA3P32297 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA3P32297 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA3P32297 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA3P32297 ADH5P3-201ENST00000433842 1137 ntBASIC16.96■□□□□ 0.31
CHRNA3P32297 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 FAM86C2P-203ENST00000528684 1004 ntBASIC16.96■□□□□ 0.31
CHRNA3P32297 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA3P32297 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 AC021097.1-201ENST00000607902 574 ntBASIC16.96■□□□□ 0.31
CHRNA3P32297 AL161645.1-201ENST00000622716 1255 ntBASIC16.96■□□□□ 0.31
CHRNA3P32297 AL513210.1-201ENST00000629608 234 ntBASIC16.96■□□□□ 0.31
CHRNA3P32297 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA3P32297 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA3P32297 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA3P32297 SSR4P1-203ENST00000599569 2260 ntBASIC16.96■□□□□ 0.31
CHRNA3P32297 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA3P32297 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA3P32297 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA3P32297 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNA3P32297 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNA3P32297 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNA3P32297 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.96■□□□□ 0.3
CHRNA3P32297 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CHRNA3P32297 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA3P32297 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CHRNA3P32297 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA3P32297 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 AC023157.3-201ENST00000619086 2088 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 AC020658.6-201ENST00000623564 1870 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNA3P32297 RNU1-129P-201ENST00000384064 167 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.95■□□□□ 0.3
CHRNA3P32297 AC004461.1-201ENST00000412461 403 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 TIMM8BP1-201ENST00000452384 211 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA3P32297 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA3P32297 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNA3P32297 AC109635.5-201ENST00000533593 962 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 U1.21-201ENST00000580816 167 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms