Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.24□□□□□ -0.13
MSR1P21757 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.24□□□□□ -0.13
MSR1P21757 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 UXT-AS1-201ENST00000590504 1525 ntBASIC14.24□□□□□ -0.13
MSR1P21757 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
MSR1P21757 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.24□□□□□ -0.13
MSR1P21757 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MSR1P21757 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.24□□□□□ -0.13
MSR1P21757 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 AP005117.1-202ENST00000581724 1908 ntBASIC14.23□□□□□ -0.13
MSR1P21757 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.23□□□□□ -0.13
MSR1P21757 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.23□□□□□ -0.13
MSR1P21757 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.23□□□□□ -0.13
MSR1P21757 LINC01225-203ENST00000563550 1244 ntBASIC14.23□□□□□ -0.13
MSR1P21757 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.23□□□□□ -0.13
MSR1P21757 MIR3687-2-201ENST00000577708 61 ntBASIC14.23□□□□□ -0.13
MSR1P21757 AC061975.2-201ENST00000581722 295 ntBASIC14.23□□□□□ -0.13
MSR1P21757 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 MIR3687-1-201ENST00000614492 61 ntBASIC14.23□□□□□ -0.13
MSR1P21757 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.23□□□□□ -0.13
MSR1P21757 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.23□□□□□ -0.13
MSR1P21757 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MSR1P21757 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.23□□□□□ -0.13
MSR1P21757 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.22□□□□□ -0.13
MSR1P21757 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.22□□□□□ -0.13
MSR1P21757 AC067930.6-201ENST00000623257 4947 ntBASIC14.22□□□□□ -0.13
MSR1P21757 AC011477.6-201ENST00000604980 1927 ntBASIC14.22□□□□□ -0.13
MSR1P21757 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 BX842568.4-201ENST00000421222 227 ntBASIC14.22□□□□□ -0.13
MSR1P21757 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.22□□□□□ -0.13
MSR1P21757 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.22□□□□□ -0.13
MSR1P21757 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.22□□□□□ -0.13
MSR1P21757 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.22□□□□□ -0.13
MSR1P21757 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.22□□□□□ -0.13
MSR1P21757 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.22□□□□□ -0.13
MSR1P21757 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MSR1P21757 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms