Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.15□□□□□ -0.14
ATF1P18846 CXCL1P1-201ENST00000502804 216 ntBASIC14.15□□□□□ -0.14
ATF1P18846 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.15□□□□□ -0.14
ATF1P18846 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.15□□□□□ -0.14
ATF1P18846 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
ATF1P18846 U1.21-201ENST00000580816 167 ntBASIC14.15□□□□□ -0.14
ATF1P18846 AL031055.1-201ENST00000606362 631 ntBASIC14.15□□□□□ -0.14
ATF1P18846 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.15□□□□□ -0.14
ATF1P18846 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
ATF1P18846 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.15□□□□□ -0.14
ATF1P18846 AC091951.1-201ENST00000512854 2465 ntBASIC14.15□□□□□ -0.14
ATF1P18846 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 AC067930.6-201ENST00000623257 4947 ntBASIC14.14□□□□□ -0.15
ATF1P18846 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ATF1P18846 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.14□□□□□ -0.15
ATF1P18846 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 PRSS29P-201ENST00000440800 595 ntBASIC14.14□□□□□ -0.15
ATF1P18846 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.14□□□□□ -0.15
ATF1P18846 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 AC148477.8-201ENST00000624298 468 ntBASIC14.14□□□□□ -0.15
ATF1P18846 AC117500.6-201ENST00000624871 588 ntBASIC14.14□□□□□ -0.15
ATF1P18846 FAM215A-202ENST00000632077 792 ntBASIC14.14□□□□□ -0.15
ATF1P18846 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ATF1P18846 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATF1P18846 U82695.1-201ENST00000635752 1889 ntBASIC14.14□□□□□ -0.15
ATF1P18846 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.14□□□□□ -0.15
ATF1P18846 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.14□□□□□ -0.15
ATF1P18846 CICP23-201ENST00000605013 2741 ntBASIC14.14□□□□□ -0.15
ATF1P18846 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ATF1P18846 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 AC090616.6-203ENST00000579186 1945 ntBASIC14.13□□□□□ -0.15
ATF1P18846 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.13□□□□□ -0.15
ATF1P18846 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATF1P18846 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.13□□□□□ -0.15
ATF1P18846 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.13□□□□□ -0.15
ATF1P18846 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 AC092910.1-201ENST00000482027 1129 ntBASIC14.13□□□□□ -0.15
ATF1P18846 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.13□□□□□ -0.15
ATF1P18846 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 AL031432.2-201ENST00000566714 459 ntBASIC14.13□□□□□ -0.15
ATF1P18846 AL928711.1-201ENST00000570165 459 ntBASIC14.13□□□□□ -0.15
ATF1P18846 MIR4751-201ENST00000578027 74 ntBASIC14.13□□□□□ -0.15
ATF1P18846 MIR3909-201ENST00000579518 119 ntBASIC14.13□□□□□ -0.15
ATF1P18846 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.13□□□□□ -0.15
ATF1P18846 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms