Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 RPS8P6-201ENST00000426177 609 ntBASIC14.8□□□□□ -0.04
THBS1P07996 HMGN1P19-201ENST00000436976 333 ntBASIC14.8□□□□□ -0.04
THBS1P07996 DNAJB3-202ENST00000449667 1266 ntBASIC14.8□□□□□ -0.04
THBS1P07996 AC079140.1-201ENST00000508039 487 ntBASIC14.8□□□□□ -0.04
THBS1P07996 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 LINC01225-203ENST00000563550 1244 ntBASIC14.8□□□□□ -0.04
THBS1P07996 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.8□□□□□ -0.04
THBS1P07996 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.8□□□□□ -0.04
THBS1P07996 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.8□□□□□ -0.04
THBS1P07996 AC084121.4-201ENST00000641598 221 ntBASIC14.8□□□□□ -0.04
THBS1P07996 AF228730.8-201ENST00000642140 221 ntBASIC14.8□□□□□ -0.04
THBS1P07996 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
THBS1P07996 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
THBS1P07996 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THBS1P07996 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
THBS1P07996 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.8□□□□□ -0.04
THBS1P07996 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.8□□□□□ -0.04
THBS1P07996 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
THBS1P07996 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 KRT8P48-201ENST00000515599 1220 ntBASIC14.79□□□□□ -0.04
THBS1P07996 IGHV3-62-201ENST00000520057 340 ntBASIC14.79□□□□□ -0.04
THBS1P07996 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.79□□□□□ -0.04
THBS1P07996 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.79□□□□□ -0.04
THBS1P07996 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.79□□□□□ -0.04
THBS1P07996 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS1P07996 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
THBS1P07996 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THBS1P07996 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 TMBIM7P-203ENST00000641617 1718 ntBASIC14.78□□□□□ -0.04
THBS1P07996 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms