Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 PRSS29P-201ENST00000440800 595 ntBASIC14.06□□□□□ -0.16
SFTPBP07988 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 HCG4B-203ENST00000450128 991 ntBASIC14.06□□□□□ -0.16
SFTPBP07988 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.06□□□□□ -0.16
SFTPBP07988 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.06□□□□□ -0.16
SFTPBP07988 ACTL9-202ENST00000612068 1252 ntBASIC14.06□□□□□ -0.16
SFTPBP07988 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.06□□□□□ -0.16
SFTPBP07988 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 TCAF2P1-201ENST00000291129 2421 ntBASIC14.05□□□□□ -0.16
SFTPBP07988 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.05□□□□□ -0.16
SFTPBP07988 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SFTPBP07988 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 MIR1233-2-201ENST00000408138 82 ntBASIC14.05□□□□□ -0.16
SFTPBP07988 MIR1233-1-201ENST00000408722 82 ntBASIC14.05□□□□□ -0.16
SFTPBP07988 IGLL3P-201ENST00000412472 434 ntBASIC14.05□□□□□ -0.16
SFTPBP07988 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.05□□□□□ -0.16
SFTPBP07988 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 AC010327.4-202ENST00000591484 748 ntBASIC14.05□□□□□ -0.16
SFTPBP07988 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.05□□□□□ -0.16
SFTPBP07988 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SFTPBP07988 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SFTPBP07988 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.05□□□□□ -0.16
SFTPBP07988 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.05□□□□□ -0.16
SFTPBP07988 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.05□□□□□ -0.16
SFTPBP07988 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SFTPBP07988 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.04□□□□□ -0.16
SFTPBP07988 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SFTPBP07988 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SFTPBP07988 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.04□□□□□ -0.16
SFTPBP07988 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 FAM185BP-201ENST00000443595 716 ntBASIC14.04□□□□□ -0.16
SFTPBP07988 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SFTPBP07988 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.04□□□□□ -0.16
SFTPBP07988 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 AC002347.1-201ENST00000569543 541 ntBASIC14.04□□□□□ -0.16
SFTPBP07988 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.04□□□□□ -0.16
SFTPBP07988 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 AC020765.3-201ENST00000613051 740 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms