Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 CICP6-201ENST00000457191 2729 ntBASIC19.23■□□□□ 0.67
CHGBP05060 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.22■□□□□ 0.67
CHGBP05060 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.22■□□□□ 0.67
CHGBP05060 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.22■□□□□ 0.67
CHGBP05060 TARDBPP1-201ENST00000442013 1203 ntBASIC19.22■□□□□ 0.67
CHGBP05060 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.22■□□□□ 0.67
CHGBP05060 AL512638.1-201ENST00000457493 794 ntBASIC19.22■□□□□ 0.67
CHGBP05060 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.22■□□□□ 0.67
CHGBP05060 AC004461.2-201ENST00000629517 803 ntBASIC19.22■□□□□ 0.67
CHGBP05060 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 AL607033.1-201ENST00000623900 1599 ntBASIC19.22■□□□□ 0.67
CHGBP05060 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHGBP05060 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CHGBP05060 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHGBP05060 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHGBP05060 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHGBP05060 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.21■□□□□ 0.67
CHGBP05060 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.21■□□□□ 0.67
CHGBP05060 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.21■□□□□ 0.67
CHGBP05060 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.21■□□□□ 0.67
CHGBP05060 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.21■□□□□ 0.67
CHGBP05060 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.21■□□□□ 0.67
CHGBP05060 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.21■□□□□ 0.67
CHGBP05060 RNA5SP421-201ENST00000516864 134 ntBASIC19.21■□□□□ 0.67
CHGBP05060 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.21■□□□□ 0.67
CHGBP05060 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.21■□□□□ 0.67
CHGBP05060 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.21■□□□□ 0.67
CHGBP05060 AC104794.3-201ENST00000566840 1248 ntBASIC19.21■□□□□ 0.67
CHGBP05060 LINC02560-201ENST00000596379 459 ntBASIC19.21■□□□□ 0.67
CHGBP05060 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.21■□□□□ 0.67
CHGBP05060 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.21■□□□□ 0.67
CHGBP05060 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.21■□□□□ 0.67
CHGBP05060 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHGBP05060 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHGBP05060 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
CHGBP05060 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHGBP05060 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.2■□□□□ 0.66
CHGBP05060 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.2■□□□□ 0.66
CHGBP05060 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.2■□□□□ 0.66
CHGBP05060 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHGBP05060 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHGBP05060 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.2■□□□□ 0.66
CHGBP05060 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.2■□□□□ 0.66
CHGBP05060 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.2■□□□□ 0.66
CHGBP05060 LINC02084-201ENST00000606069 1096 ntBASIC19.2■□□□□ 0.66
CHGBP05060 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.2■□□□□ 0.66
CHGBP05060 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.2■□□□□ 0.66
CHGBP05060 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms