Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.55□□□□□ -0.24
CD74P04233 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD74P04233 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 AC006504.4-201ENST00000592118 1568 ntBASIC13.54□□□□□ -0.24
CD74P04233 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 AL031133.1-201ENST00000406807 723 ntBASIC13.54□□□□□ -0.24
CD74P04233 ELK2BP-201ENST00000415014 1224 ntBASIC13.54□□□□□ -0.24
CD74P04233 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.54□□□□□ -0.24
CD74P04233 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.54□□□□□ -0.24
CD74P04233 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 KRT16P4-201ENST00000453883 522 ntBASIC13.54□□□□□ -0.24
CD74P04233 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.54□□□□□ -0.24
CD74P04233 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.54□□□□□ -0.24
CD74P04233 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 AC116407.4-201ENST00000623319 1061 ntBASIC13.54□□□□□ -0.24
CD74P04233 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CD74P04233 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.54□□□□□ -0.24
CD74P04233 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD74P04233 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.54□□□□□ -0.24
CD74P04233 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 AC067930.6-201ENST00000623257 4947 ntBASIC13.53□□□□□ -0.24
CD74P04233 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CD74P04233 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CD74P04233 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 RNU1-129P-201ENST00000384064 167 ntBASIC13.53□□□□□ -0.24
CD74P04233 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.53□□□□□ -0.24
CD74P04233 AP000867.3-201ENST00000524675 377 ntBASIC13.53□□□□□ -0.24
CD74P04233 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.53□□□□□ -0.24
CD74P04233 MIR3180-1-201ENST00000580374 94 ntBASIC13.53□□□□□ -0.24
CD74P04233 U1.21-201ENST00000580816 167 ntBASIC13.53□□□□□ -0.24
CD74P04233 MIR3180-3-201ENST00000584616 94 ntBASIC13.53□□□□□ -0.24
CD74P04233 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.53□□□□□ -0.24
CD74P04233 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.53□□□□□ -0.24
CD74P04233 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CD74P04233 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.53□□□□□ -0.24
CD74P04233 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD74P04233 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms