Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FAM86GP-201ENST00000448322 971 ntBASIC15.36■□□□□ 0.05
LCMT2O60294 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.36■□□□□ 0.05
LCMT2O60294 AC125807.1-201ENST00000483097 614 ntBASIC15.36■□□□□ 0.05
LCMT2O60294 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.36■□□□□ 0.05
LCMT2O60294 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 AL079307.3-201ENST00000556114 283 ntBASIC15.36■□□□□ 0.05
LCMT2O60294 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.36■□□□□ 0.05
LCMT2O60294 AL589739.1-201ENST00000607720 493 ntBASIC15.36■□□□□ 0.05
LCMT2O60294 AC106028.4-201ENST00000614509 607 ntBASIC15.36■□□□□ 0.05
LCMT2O60294 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.36■□□□□ 0.05
LCMT2O60294 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LCMT2O60294 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.36■□□□□ 0.05
LCMT2O60294 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.36■□□□□ 0.05
LCMT2O60294 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LCMT2O60294 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LCMT2O60294 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LCMT2O60294 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.36■□□□□ 0.05
LCMT2O60294 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.36■□□□□ 0.05
LCMT2O60294 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCMT2O60294 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 PRAL-201ENST00000624952 3286 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 AC011477.6-201ENST00000604980 1927 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 PAUPAR-201ENST00000630360 2965 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LCMT2O60294 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LCMT2O60294 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.35■□□□□ 0.05
LCMT2O60294 SPDYE17-201ENST00000412399 783 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 RPL37AP1-201ENST00000412502 279 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.35■□□□□ 0.05
LCMT2O60294 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 AC107890.1-201ENST00000422478 521 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 AC067863.1-201ENST00000494933 530 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 AC097493.3-201ENST00000509725 367 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 AC140878.1-201ENST00000565277 250 ntBASIC15.35■□□□□ 0.05
LCMT2O60294 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.35■□□□□ 0.05
LCMT2O60294 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.35■□□□□ 0.05
LCMT2O60294 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LCMT2O60294 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LCMT2O60294 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCMT2O60294 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.35■□□□□ 0.05
LCMT2O60294 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.35■□□□□ 0.05
LCMT2O60294 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 KRT8P37-201ENST00000451609 1420 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.34■□□□□ 0.05
LCMT2O60294 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LCMT2O60294 AC007950.2-201ENST00000615045 2347 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.34■□□□□ 0.05
LCMT2O60294 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.34■□□□□ 0.05
LCMT2O60294 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms