Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.07■□□□□ 0.32
CEP290O15078 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CEP290O15078 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 AC005622.1-201ENST00000636801 1703 ntBASIC17.07■□□□□ 0.32
CEP290O15078 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
CEP290O15078 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.06■□□□□ 0.32
CEP290O15078 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 AC007881.3-201ENST00000608897 607 ntBASIC17.06■□□□□ 0.32
CEP290O15078 AC090164.3-201ENST00000610780 2143 ntBASIC17.06■□□□□ 0.32
CEP290O15078 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.06■□□□□ 0.32
CEP290O15078 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CEP290O15078 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.06■□□□□ 0.32
CEP290O15078 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.06■□□□□ 0.32
CEP290O15078 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 AC079328.2-201ENST00000561241 3354 ntBASIC17.06■□□□□ 0.32
CEP290O15078 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CEP290O15078 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 AC098818.2-201ENST00000564925 2320 ntBASIC17.06■□□□□ 0.32
CEP290O15078 AL157792.1-201ENST00000488281 530 ntBASIC17.06■□□□□ 0.32
CEP290O15078 AC027139.1-201ENST00000565286 951 ntBASIC17.06■□□□□ 0.32
CEP290O15078 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CEP290O15078 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEP290O15078 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CEP290O15078 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 AC087289.5-201ENST00000586076 3175 ntBASIC17.05■□□□□ 0.32
CEP290O15078 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CEP290O15078 AC136604.1-201ENST00000418535 575 ntBASIC17.05■□□□□ 0.32
CEP290O15078 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CEP290O15078 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.05■□□□□ 0.32
CEP290O15078 AL118516.1-201ENST00000564152 670 ntBASIC17.05■□□□□ 0.32
CEP290O15078 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.05■□□□□ 0.32
CEP290O15078 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 AL691432.1-201ENST00000596308 1422 ntBASIC17.05■□□□□ 0.32
CEP290O15078 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 AL603756.1-201ENST00000606511 2163 ntBASIC17.05■□□□□ 0.32
CEP290O15078 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.05■□□□□ 0.32
CEP290O15078 AC019193.1-201ENST00000506678 823 ntBASIC17.05■□□□□ 0.32
CEP290O15078 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.05■□□□□ 0.32
CEP290O15078 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
CEP290O15078 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.05■□□□□ 0.32
CEP290O15078 AC073413.1-201ENST00000603927 732 ntBASIC17.05■□□□□ 0.32
CEP290O15078 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEP290O15078 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.04■□□□□ 0.32
CEP290O15078 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.04■□□□□ 0.32
CEP290O15078 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 TPM3P8-201ENST00000330554 643 ntBASIC17.04■□□□□ 0.32
CEP290O15078 DPM3-202ENST00000368399 517 ntBASIC17.04■□□□□ 0.32
CEP290O15078 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 AC006335.1-201ENST00000445200 547 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms