Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 MIR661-201ENST00000384842 89 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AC025048.3-201ENST00000590609 569 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AL450472.2-201ENST00000603663 1156 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AC005702.4-201ENST00000618393 416 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AC004840.1-201ENST00000636359 365 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AL109936.8-201ENST00000641772 604 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 TSPY16P-201ENST00000449843 468 ntBASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
YJEFN3A6XGL0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 FAM8A3P-201ENST00000427218 844 ntBASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms