Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-7A0A0A0MS04 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC011477.6-201ENST00000604980 1927 ntBASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 KRT18P34-201ENST00000488218 1270 ntBASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 KRT18P56-201ENST00000507275 550 ntBASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRBV6-7A0A0A0MS04 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 IGLL3P-201ENST00000412472 434 ntBASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 AL009183.1-201ENST00000603760 355 ntBASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 AL078644.1-201ENST00000609881 752 ntBASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-7A0A0A0MS04 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms