Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AL365181.3-201ENST00000605886 3222 ntBASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PCDHB18P-202ENST00000526308 3197 ntBASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LINC01558Q9Y6Z2 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms