Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 AC007686.3-201ENST00000619017 3487 ntBASIC15.64■□□□□ 0.1
NDE1Q9NXR1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
NDE1Q9NXR1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
NDE1Q9NXR1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NDE1Q9NXR1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SLC22A20-204ENST00000530038 1673 ntBASIC15.64■□□□□ 0.09
NDE1Q9NXR1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 HAUS4P1-201ENST00000406739 1145 ntBASIC15.64■□□□□ 0.09
NDE1Q9NXR1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 PMS2P1-201ENST00000431037 1228 ntBASIC15.64■□□□□ 0.09
NDE1Q9NXR1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AL139424.1-201ENST00000607572 797 ntBASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.64■□□□□ 0.09
NDE1Q9NXR1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NDE1Q9NXR1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 AL390755.1-201ENST00000623716 2027 ntBASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 AC005412.3-201ENST00000580309 715 ntBASIC15.63■□□□□ 0.09
NDE1Q9NXR1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.63■□□□□ 0.09
NDE1Q9NXR1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NDE1Q9NXR1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms