Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.99■□□□□ 0.31
CD248Q9HCU0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 AC055876.3-201ENST00000431496 288 ntBASIC16.98■□□□□ 0.31
CD248Q9HCU0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.98■□□□□ 0.31
CD248Q9HCU0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 AC026150.2-201ENST00000564693 1156 ntBASIC16.98■□□□□ 0.31
CD248Q9HCU0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 AC138649.4-201ENST00000612222 287 ntBASIC16.98■□□□□ 0.31
CD248Q9HCU0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CD248Q9HCU0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD248Q9HCU0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 WASH6P-202ENST00000359512 1437 ntBASIC16.97■□□□□ 0.31
CD248Q9HCU0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 MIR346-201ENST00000362234 95 ntBASIC16.97■□□□□ 0.31
CD248Q9HCU0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 COX20P2-201ENST00000452636 358 ntBASIC16.97■□□□□ 0.31
CD248Q9HCU0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 MIR4745-201ENST00000577608 62 ntBASIC16.97■□□□□ 0.31
CD248Q9HCU0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 AJ011932.1-201ENST00000621707 465 ntBASIC16.97■□□□□ 0.31
CD248Q9HCU0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD248Q9HCU0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.97■□□□□ 0.31
CD248Q9HCU0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms