Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 DUSP5P1-201ENST00000441325 1139 ntBASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 AC005593.1-201ENST00000624894 515 ntBASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
COMMD4Q9H0A8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 AC099063.4-201ENST00000641099 1602 ntBASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 RPS2P1-201ENST00000434010 821 ntBASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 AC245100.5-201ENST00000452108 331 ntBASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 AL365330.1-201ENST00000607459 531 ntBASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.26□□□□□ -0.13
COMMD4Q9H0A8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AC087481.3-201ENST00000602886 1894 ntBASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms