Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP3-1Q9BYR8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AL354892.3-201ENST00000586101 1630 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 LAGE3P1-201ENST00000425356 484 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC093724.1-201ENST00000448659 1027 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 NMU-205ENST00000511469 756 ntTSL 3 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 KRT18P21-201ENST00000515767 1272 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC009268.1-201ENST00000561352 1203 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC087388.1-201ENST00000571370 1112 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 MIR4515-201ENST00000584082 81 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC006557.2-201ENST00000592985 1240 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC008667.4-201ENST00000607370 168 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC083964.1-201ENST00000607549 630 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC110792.4-201ENST00000609843 298 ntBASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms