Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AC004840.1-201ENST00000636359 365 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AL596087.1-201ENST00000400979 1969 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AC011477.6-201ENST00000604980 1927 ntBASIC16.64■□□□□ 0.26
CDK5RAP1Q96SZ6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CICP6-201ENST00000457191 2729 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 Z97205.2-201ENST00000564697 1639 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 MIR661-201ENST00000384842 89 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 MEP1AP4-201ENST00000423244 1087 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 TIMM17BP1-201ENST00000545713 516 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 AC027307.3-201ENST00000594262 1100 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 AL109936.8-201ENST00000641772 604 ntBASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP1Q96SZ6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 PHKG1P2-201ENST00000457537 863 ntBASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC093004.1-201ENST00000508850 424 ntBASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AL450472.2-201ENST00000603663 1156 ntBASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 AC134407.2-201ENST00000625089 1978 ntBASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP1Q96SZ6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms