Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MS4A4EQ96PG1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.03■□□□□ -0
MS4A4EQ96PG1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.03■□□□□ -0
MS4A4EQ96PG1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MS4A4EQ96PG1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 AC092850.2-201ENST00000623821 2697 ntBASIC15.02■□□□□ -0
MS4A4EQ96PG1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 RPS8P6-201ENST00000426177 609 ntBASIC15.02■□□□□ -0
MS4A4EQ96PG1 AC005237.2-201ENST00000434368 219 ntBASIC15.02■□□□□ -0
MS4A4EQ96PG1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.02■□□□□ -0
MS4A4EQ96PG1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.02■□□□□ -0
MS4A4EQ96PG1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 PRAL-201ENST00000624952 3286 ntBASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MS4A4EQ96PG1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AL691432.1-201ENST00000596308 1422 ntBASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 KRT18P32-201ENST00000424695 1287 ntBASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AP000344.2-201ENST00000512987 629 ntBASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AC026979.3-201ENST00000607315 403 ntBASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms