Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 MAPK10-262ENST00000641051 5738 ntBASIC12.24□□□□□ -0.45
AP1S3Q96PC3 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 LINC01238-205ENST00000567549 1107 ntBASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.24□□□□□ -0.45
AP1S3Q96PC3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 AC002310.6-201ENST00000624451 1377 ntBASIC12.23□□□□□ -0.45
AP1S3Q96PC3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 AL020989.1-201ENST00000422979 469 ntBASIC12.23□□□□□ -0.45
AP1S3Q96PC3 AL845331.1-201ENST00000424978 1190 ntBASIC12.23□□□□□ -0.45
AP1S3Q96PC3 SPDYE13P-201ENST00000445314 798 ntBASIC12.23□□□□□ -0.45
AP1S3Q96PC3 NUS1P1-201ENST00000446295 882 ntBASIC12.23□□□□□ -0.45
AP1S3Q96PC3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 AC133561.5-201ENST00000635547 218 ntBASIC12.23□□□□□ -0.45
AP1S3Q96PC3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
AP1S3Q96PC3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms