Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 AC132938.2-201ENST00000579188 680 ntBASIC18.62■□□□□ 0.57
CCDC17Q96LX7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 WFDC1-204ENST00000613603 549 ntBASIC18.62■□□□□ 0.57
CCDC17Q96LX7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 AL591163.1-201ENST00000641757 987 ntBASIC18.62■□□□□ 0.57
CCDC17Q96LX7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 CDC14C-201ENST00000428251 1719 ntBASIC18.61■□□□□ 0.57
CCDC17Q96LX7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 OR8S1-201ENST00000310194 1080 ntBASIC18.61■□□□□ 0.57
CCDC17Q96LX7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 U91328.1-201ENST00000437528 223 ntBASIC18.61■□□□□ 0.57
CCDC17Q96LX7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 RN7SL837P-201ENST00000463010 287 ntBASIC18.61■□□□□ 0.57
CCDC17Q96LX7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC17Q96LX7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 AL442647.2-201ENST00000429864 857 ntBASIC18.6■□□□□ 0.57
CCDC17Q96LX7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 KRT18P64-201ENST00000434946 1219 ntBASIC18.6■□□□□ 0.57
CCDC17Q96LX7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC17Q96LX7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms