Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 AC106881.1-201ENST00000605849 3329 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 AC020658.6-201ENST00000623564 1870 ntBASIC14.32□□□□□ -0.12
RFT1Q96AA3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 PMS2P1-201ENST00000431037 1228 ntBASIC14.32□□□□□ -0.12
RFT1Q96AA3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 POU5F1P6-201ENST00000466990 990 ntBASIC14.32□□□□□ -0.12
RFT1Q96AA3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 MIR4492-201ENST00000581627 80 ntBASIC14.32□□□□□ -0.12
RFT1Q96AA3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 REXO1L3P-201ENST00000622202 1288 ntBASIC14.32□□□□□ -0.12
RFT1Q96AA3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFT1Q96AA3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RFT1Q96AA3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 AC005089.1-201ENST00000619486 2241 ntBASIC14.31□□□□□ -0.12
RFT1Q96AA3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 SAPCD2P3-201ENST00000455031 850 ntBASIC14.31□□□□□ -0.12
RFT1Q96AA3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 AF238378.1-201ENST00000526806 358 ntBASIC14.31□□□□□ -0.12
RFT1Q96AA3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms