Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 PKD1P5-201ENST00000532415 10291 ntBASIC15.24■□□□□ 0.03
TM9SF4Q92544 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 AC092580.3-201ENST00000430932 139 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 HLA-V-204ENST00000476601 1289 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 AC100757.3-201ENST00000622361 1406 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 AP3S2-216ENST00000617003 1561 ntBASIC15.23■□□□□ 0.03
TM9SF4Q92544 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF4Q92544 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF4Q92544 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 LINC00895-201ENST00000629028 1637 ntBASIC15.22■□□□□ 0.03
TM9SF4Q92544 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AC004890.2-204ENST00000481968 304 ntBASIC15.22■□□□□ 0.03
TM9SF4Q92544 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AL138918.1-201ENST00000568306 659 ntBASIC15.22■□□□□ 0.03
TM9SF4Q92544 MIR4492-201ENST00000581627 80 ntBASIC15.22■□□□□ 0.03
TM9SF4Q92544 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 MTHFR-217ENST00000641820 1569 ntBASIC15.22■□□□□ 0.03
TM9SF4Q92544 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms