Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 KRT18P32-201ENST00000424695 1287 ntBASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH19Q8TAB3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH19Q8TAB3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AC004987.2-201ENST00000395959 1148 ntBASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AL645939.2-201ENST00000427340 991 ntBASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 AC106028.4-201ENST00000614509 607 ntBASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 CICP13-201ENST00000422015 2789 ntBASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH19Q8TAB3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH19Q8TAB3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms