Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 FO538757.1-201ENST00000623083 1397 ntBASIC16.47■□□□□ 0.23
RTL3Q8N8U3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.47■□□□□ 0.23
RTL3Q8N8U3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.46■□□□□ 0.23
RTL3Q8N8U3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 MIR943-201ENST00000401286 94 ntBASIC16.46■□□□□ 0.23
RTL3Q8N8U3 RPL37AP1-201ENST00000412502 279 ntBASIC16.46■□□□□ 0.23
RTL3Q8N8U3 TREML5P-201ENST00000421694 576 ntBASIC16.46■□□□□ 0.23
RTL3Q8N8U3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 DUX4L27-201ENST00000554796 1261 ntBASIC16.46■□□□□ 0.23
RTL3Q8N8U3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 AC093512.1-201ENST00000617969 520 ntBASIC16.46■□□□□ 0.23
RTL3Q8N8U3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL3Q8N8U3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RTL3Q8N8U3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.46■□□□□ 0.22
RTL3Q8N8U3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTL3Q8N8U3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.46■□□□□ 0.22
RTL3Q8N8U3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 AC092580.3-201ENST00000430932 139 ntBASIC16.45■□□□□ 0.22
RTL3Q8N8U3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL3Q8N8U3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 AC022188.1-201ENST00000620960 1664 ntBASIC16.44■□□□□ 0.22
RTL3Q8N8U3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL3Q8N8U3 FO393414.2-201ENST00000405153 598 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms