Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 AC105233.2-201ENST00000523697 349 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 AF228730.5-201ENST00000530288 346 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 AC027307.2-201ENST00000591252 911 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 AC073389.1-201ENST00000595595 795 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 SPTSSB-204ENST00000617024 1292 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFX6Q8HWS3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 GPX1P2-201ENST00000429271 606 ntBASIC16.76■□□□□ 0.27
RFX6Q8HWS3 AC098859.1-201ENST00000502915 1238 ntBASIC16.76■□□□□ 0.27
RFX6Q8HWS3 POLD2P1-201ENST00000511220 997 ntBASIC16.76■□□□□ 0.27
RFX6Q8HWS3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 AC040169.1-201ENST00000565382 521 ntBASIC16.76■□□□□ 0.27
RFX6Q8HWS3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 AC092902.6-201ENST00000641783 218 ntBASIC16.76■□□□□ 0.27
RFX6Q8HWS3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX6Q8HWS3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 AL022342.1-201ENST00000400363 863 ntBASIC16.75■□□□□ 0.27
RFX6Q8HWS3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 KRT18P58-201ENST00000527480 1120 ntBASIC16.75■□□□□ 0.27
RFX6Q8HWS3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX6Q8HWS3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms