Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD1LQ86WJ1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AP3S2-216ENST00000617003 1561 ntBASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AL592309.1-201ENST00000443127 649 ntBASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 MIR4313-201ENST00000580760 101 ntBASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD1LQ86WJ1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 UXT-AS1-201ENST00000590504 1525 ntBASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 ELL2P1-201ENST00000413990 1906 ntBASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 AC090616.6-203ENST00000579186 1945 ntBASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.83■□□□□ 0.77
CHD1LQ86WJ1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 DBET-201ENST00000630918 3363 ntBASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 CYP4F24P-201ENST00000586049 1580 ntBASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.83■□□□□ 0.76
CHD1LQ86WJ1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 TMBIM7P-203ENST00000641617 1718 ntBASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 AC103702.1-201ENST00000548801 2630 ntBASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD1LQ86WJ1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms