Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PACS2Q86VP3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.3■□□□□ 0.2
PACS2Q86VP3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.3■□□□□ 0.2
PACS2Q86VP3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.3■□□□□ 0.2
PACS2Q86VP3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
PACS2Q86VP3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.3■□□□□ 0.2
PACS2Q86VP3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACS2Q86VP3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.29■□□□□ 0.2
PACS2Q86VP3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 AC097374.2-201ENST00000618617 1306 ntBASIC16.29■□□□□ 0.2
PACS2Q86VP3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 BNIP3P18-201ENST00000593976 575 ntBASIC16.29■□□□□ 0.2
PACS2Q86VP3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 AC114341.1-201ENST00000618070 349 ntBASIC16.29■□□□□ 0.2
PACS2Q86VP3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACS2Q86VP3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.29■□□□□ 0.2
PACS2Q86VP3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 RN7SL440P-201ENST00000577855 343 ntBASIC16.28■□□□□ 0.2
PACS2Q86VP3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 AL591684.3-201ENST00000605187 298 ntBASIC16.28■□□□□ 0.2
PACS2Q86VP3 AL732292.2-201ENST00000609649 430 ntBASIC16.28■□□□□ 0.2
PACS2Q86VP3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 AC107308.1-201ENST00000615897 301 ntBASIC16.28■□□□□ 0.2
PACS2Q86VP3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACS2Q86VP3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.28■□□□□ 0.2
PACS2Q86VP3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms