Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 RTN3P1-201ENST00000536295 711 ntBASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 AC005324.6-201ENST00000587972 613 ntBASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 AC138894.2-201ENST00000602838 371 ntBASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 AC103691.2-201ENST00000618824 433 ntBASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RGPD4Q7Z3J3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AC004899.1-201ENST00000424687 1714 ntBASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AC007787.1-201ENST00000588095 1583 ntBASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 AC009053.2-201ENST00000563701 2365 ntBASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.79■□□□□ 0.76
RGPD4Q7Z3J3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 NEFHP1-201ENST00000412845 2629 ntBASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 RNMTL1P1-201ENST00000454103 560 ntBASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 AC090164.2-201ENST00000611487 516 ntBASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.78■□□□□ 0.76
RGPD4Q7Z3J3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RGPD4Q7Z3J3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms