Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SPDYE17-201ENST00000412399 783 ntBASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AL080243.2-201ENST00000418783 582 ntBASIC15.43■□□□□ 0.06
RNF44Q7L0R7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AL079307.3-201ENST00000556114 283 ntBASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 AC006449.5-201ENST00000610658 2098 ntBASIC15.42■□□□□ 0.06
RNF44Q7L0R7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 CYP4F24P-201ENST00000586049 1580 ntBASIC15.42■□□□□ 0.06
RNF44Q7L0R7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.42■□□□□ 0.06
RNF44Q7L0R7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 IGHV3-42-201ENST00000520410 361 ntBASIC15.42■□□□□ 0.06
RNF44Q7L0R7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 AL136982.4-201ENST00000437689 1740 ntBASIC15.42■□□□□ 0.06
RNF44Q7L0R7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF44Q7L0R7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 RPL37AP1-201ENST00000412502 279 ntBASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 AC243562.2-201ENST00000561247 970 ntBASIC15.41■□□□□ 0.06
RNF44Q7L0R7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TEX28P1-201ENST00000613479 1221 ntBASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TEX28P2-201ENST00000617764 1221 ntBASIC15.41■□□□□ 0.06
RNF44Q7L0R7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms